Job Description Q46810 Confidence 99.83% Date Thu Jan 5 12:34:38 GMT 2012 Rank 50 Aligned Residues 191 % Identity 17% Template c3brkX_ PDB info PDB header:transferase Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.												.													.																								.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.												.													.																								.	.	.	.	.	.	.	.
Query Sequence		M	S	A	I	D	C	I	I	T	A	A	G	L	S	S	R	M	G	Q	.	.	.	.	.	W	K	M	M	L	P	W	E	Q	G	T	.	I	L	D	T	S	I	K	N	A	L	Q	F	.	C	S	R	I	I	L	V	T	G	Y	R	G	N	E	L	H	E	R	Y	A	N	Q	S	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.												.													.																								.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.												.													.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	D	A	X	A	Y	V	L	A	G	G	R	G	S	R	L	K	E	L	T	D	R	R	A	K	P	A	V	Y	F	G	G	K	A	R	I	I	D	F	A	L	S	N	A	L	N	S	G	I	R	R	I	G	V	A	T	Q	Y	K	A	H	S	L	I	R	H	L	Q	R	G	W	D	F	F	R	P	E	R	N
Template Known Secondary structure		G	G	G												G	G	G	G	G	G	G	S	S	S		G	G	G	S			T	T	T			T											T	T										T	T												S					G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																											.	.	.															.																													.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.															.																													.	.	.	.	.	.	.	.	.
Query Sequence		N	I	T	I	I	H	N	P	D	Y	A	Q	G	L	L	T	S	V	K	A	A	V	P	A	V	.	.	.	Q	T	E	H	C	F	L	T	H	G	D	M	P	T	.	L	T	I	D	I	F	R	K	I	W	S	L	R	N	D	G	A	I	L	P	L	H	N	G	I	P	G	H	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.															.																													.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.															.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	F	D	I	L	P	A	S	W	Y	E	G	T	A	D	A	V	Y	Q	N	I	D	I	I	E	P	Y	A	P	E	Y	X	V	I	L	A	G	D	H	I	Y	K	X	D	Y	E	Y	X	L	Q	Q	H	V	D	S	G	A	D	V	T	I	G	C	L	E	V	P	R	X	E	A	T	G	F	G	V	X	H	V
Template Known Secondary structure																					T	T										S							S	S					B		T										T	T		S										T	T	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
																																	133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	L	V	S	K	P	C	L	M	Q	A	I	Q	R	P	N	V	T	N	M	R	Q	A	L	L	M	G	D	H	Y	S	V	E	I	.	.	.	.	.	.	.	.	.	E	N	A	E	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	K	D	E	I	I	D	F	I	E	K	P	A	D	P	P	G	I	P	G	N	E	G	F	A	L	A	S	X	G	I	Y	V	F	H	T	K	F	L	X	E	A	V	R	R	D	A	A	D	I	I	P	Y	I	V	E	H	G	K	A	V	A	H	R	F	A	D	S	C	V	R	S	D	F	E	H	E	P	Y
Template Known Secondary structure			T	T	S	B							S		S	S				B	T	T	B	T	T																					T	S	S					T	T						S											B				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	D	I	D	T	P	D	D	F	I	T	A	K	E	R	Y	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	R	D	V	G	T	I	D	A	Y	W	Q	A	N	I	D	L	T	D
Template Known Secondary structure							S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions