Return to main results Retrieve Phyre Job Id

Job DescriptionQ46810
Confidence100.00%DateThu Jan 5 12:34:38 GMT 2012
Rank4Aligned Residues172
% Identity17%Templatec2e8bA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:probable molybdopterin-guanine dinucleotide biosynthesis PDBTitle: crystal structure of the putative protein (aq1419) from aquifex2 aeolicus vf5
Resolution1.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1.... ....10.........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 


.

































Query SS confidence 




.









































































Query Sequence  MSAID. CIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGL
Query Conservation 
  
 .






 
 


  
 

 
 
 


   
  
       


                              
Alig confidence 




.
















































......


















Template Conservation 
     






 
 


  
 

 
 




   
  
       


     ......                 
 
Template Sequence  LSKVNTCYVLAGGKSKRFGEDKLLYEIKGKKVIERVYETAKSVFKEVYIVAKDRE. . . . . . KFSFLNAPVVLDEFEESAS
Template Known Secondary structure  S
S

SS



STTTT
SS
SG......GGGGGT




SS

Template Predicted Secondary structure 


























......













Template SS confidence 















































































   11........20.........30.........40.........50.........60..... ....70.........80....
 
   80.........90.........100.........110.........120.........130.........140....... ..150.......
Predicted Secondary structure 























..




Query SS confidence 



































































. .









Query Sequence  LTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQR. . PNVTNMRQAL
Query Conservation                  

   
 
 
    
  
                 
 
              ..         
Alig confidence 



































































..









Template Conservation     
   
         
   
 
 
    
  
                 
   
        
      
   
   
Template Sequence  IIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLENFKEPVSVAKTEKLHTLVGVYSKKLLEKIEERIKKGDYRIWALL
Template Known Secondary structure 
SSSTT
TT

T

SSSSSGGGTT


Template Predicted Secondary structure 


























Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   158.160.........170.. ......
Predicted Secondary structure 





..





Query SS confidence 














. .





Query Sequence  LMGDHYSVEIENAEI. . ILDIDT
Query Conservation         
       ..  



Alig confidence 














..





Template Conservation         
           



Template Sequence  KDVGYNEVEIPEELRYTLLNMNT
Template Known Secondary structure 



GGGGGGG

S

Template Predicted Secondary structure 
















Template SS confidence 






















   165....170.........180.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions