Return to main results Retrieve Phyre Job Id

Job DescriptionQ46810
Confidence99.76%DateThu Jan 5 12:34:38 GMT 2012
Rank55Aligned Residues189
% Identity17%Templatec1yp3C_
PDB info PDB header:transferaseChain: C: PDB Molecule:glucose-1-phosphate adenylyltransferase small PDBTitle: crystal structure of potato tuber adp-glucose2 pyrophosphorylase in complex with atp
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10......... 20........ .30.........40.. .......50.........60... ..
Predicted Secondary structure 










.....




.
.






..........

Query SS confidence 
















. . . . .








.













.




















. . . . . . . . . .

Query Sequence  AIDCIITAAGLSSRMGQ. . . . . WKMMLPWEQ. GTILDTSIKNALQF. CSRIILVTGYRGNELHERYAN. . . . . . . . . . QS
Query Conservation   
 






 
 


 ..... 
 

 
 
. 


   
  
   .    


              ..........  
Alig confidence 
















.....








.













.




















..........

Template Conservation     






 
 

 


   

 



 

 


   
  
   

  
 

       
   
              
Template Sequence  SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASEGFVEVLA
Template Known Secondary structure 

SS
TTSTTTTTTS
GGGSTTTTTTT

SS





Template Predicted Secondary structure 


































Template SS confidence 















































































   20.........30.........40.........50.........60.........70.........80.........90.........
 
   66...70.........80.........90.... .....100.... .....110.........120.........130...
Predicted Secondary structure 












...





.












........
Query SS confidence 




























. . .









.




























. . . . . . . .
Query Sequence  NITIIHNPDYAQGLLTSVKAAVPAVQTEH. . . CFLTHGDMPT. LTIDIFRKIWSLRNDGAILPLHNGIPGHP. . . . . . . .
Query Conservation                               ... 

   
 
 .
    
  
                 
 
........
Alig confidence 




























...









.




























........
Template Conservation              

  

      
        

  

 
    
   
  
    
  

             
 
  
Template Sequence  AQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKI
Template Known Secondary structure  SS
SSS

SS


TTS

SSS



TT
S
TTS
Template Predicted Secondary structure 
































Template SS confidence 















































































   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   134.....140.........150. ........160.
Predicted Secondary structure  ..............................................




......


Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

















. . . . . .









Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ILVSKPCLMQAIQRPNVT. . . . . . NMRQALLMGD
Query Conservation  ..............................................                  ......     
    
Alig confidence  ..............................................

















......









Template Conservation 
    
    

                            
   



 
   
                
 
       
Template Sequence  DEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSLG
Template Known Secondary structure 
TT
BS

TT


GGGGT



TT
TT


TTTTTTT
Template Predicted Secondary structure 








































Template SS confidence 















































































   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   162.......170.........180.........190.
Predicted Secondary structure 











Query SS confidence 





























Query Sequence  HYSVEIENAEIILDIDTPDDFITAKERYTE
Query Conservation     
         






   
      
Alig confidence 





























Template Conservation    
           
         
   
 
Template Sequence  MRVQAYLYDGYWEDIGTIEAFYNANLGITK
Template Known Secondary structure 



S


SSGGG
Template Predicted Secondary structure 







Template SS confidence 





























   267..270.........280.........290......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions