Return to main results Retrieve Phyre Job Id

Job DescriptionQ46810
Confidence99.97%DateThu Jan 5 12:34:38 GMT 2012
Rank10Aligned Residues184
% Identity14%Templatec1w57A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ispd/ispf bifunctional enzyme; PDBTitle: structure of the bifunctional ispdf from campylobacter2 jejuni containing zn
Resolution3.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10......... 20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 










..























Query SS confidence 
















. .




























































Query Sequence  AIDCIITAAGLSSRMGQ. . WKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLL
Query Conservation   
 






 
 


 .. 
 

 
 
 


   
  
       


                               
Alig confidence 
















..

















































.....





Template Conservation   








 




   




 
 




  

           


                

 .....

  
 
Template Sequence  EMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSSNITYMKKFTKNYEFIE. . . . . GGDTRA
Template Known Secondary structure 





TTT
SSS
GGG
BTTTS

S
S
TT
SSS.....

SS
Template Predicted Secondary structure 






























.....



Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70. ......
 
   81........90.........100.........110.........120.........130.. .......140..
Predicted Secondary structure 





















..................

Query SS confidence 



















































. . . . . . . . . . . . . . . . . .









Query Sequence  TSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGH. . . . . . . . . . . . . . . . . . PILVSKPCLM
Query Conservation                 

   
 
 
    
  
                 
 ..................
         
Alig confidence 



















































..................









Template Conservation   

  

  
  
 











   
  

        


 


 



 
  



  
  




 

   
 
Template Sequence  ESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKADCITPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLK
Template Known Secondary structure  TT

SSTT
TT

TTTTSSS


S
SSSS
GGG


S
Template Predicted Secondary structure 



























Template SS confidence 















































































   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   143.... ..150.........160.........170.........180.........190.
Predicted Secondary structure  .


















Query SS confidence 




.











































Query Sequence  QAIQR. PNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTE
Query Conservation       .         
       
         






   
      
Alig confidence 




.











































Template Conservation   
       





 
  
  
  
 
   
 







  

  
 
Template Sequence  KALDQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPTPS
Template Known Secondary structure  TSS



SSTTT



GGG



SGGGGGGS



B
Template Predicted Secondary structure 





















Template SS confidence 

















































   158.160.........170.........180.........190.........200.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions