Job Description Q46810 Confidence 99.93% Date Thu Jan 5 12:34:38 GMT 2012 Rank 28 Aligned Residues 185 % Identity 16% Template c1jylC_ PDB info PDB header:transferase Chain: C: PDB Molecule:ctp:phosphocholine cytidylytransferase; PDBTitle: catalytic mechanism of ctp:phosphocholine2 cytidylytransferase from streptococcus pneumoniae (licc) Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																								.
Query SS confidence																					.	.	.	.	.																								.
Query Sequence		M	S	A	I	D	C	I	I	T	A	A	G	L	S	S	R	M	G	Q	.	.	.	.	.	W	K	M	M	L	P	W	E	Q	G	T	I	L	D	T	S	I	K	N	A	L	Q	F	.	C	S	R	I	I	L	V	T	G	Y	R	G	N	E	L	H	E	R	Y	A	N	Q	S	N	I	T	I	I	H	N	P	D
Query Conservation																					.	.	.	.	.																								.
Alig confidence					.																.	.	.	.	.																								.
Template Conservation					.
Template Sequence		I	R	V	.	K	A	I	I	L	A	A	G	L	G	T	R	L	R	P	L	T	E	N	T	P	K	A	L	V	Q	V	N	Q	K	P	L	I	E	Y	Q	I	E	F	L	K	E	K	G	I	N	D	I	I	I	I	V	G	Y	L	K	E	Q	F	D	Y	L	K	E	K	Y	G	V	R	L	V	F	N	D	K	Y
Template Known Secondary structure					.								S			G	G	G	T	T	T	T	S	S	S		G	G	G		B	S	S	S	S	B												T	T										T	T	G	G	G	G															T	T	T
Template Predicted Secondary structure					.
Template SS confidence
		4	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	Q	G	L	L	T	S	V	K	A	A	V	P	A	V	Q	T	E	H	C	F	L	T	H	G	D	M	P	T	L	T	I	D	I	F	R	K	I	W	S	L	R	N	D	G	A	I	L	P	L	H	N	G	I	P	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.											.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.											.
Template Sequence		A	D	Y	N	N	F	Y	S	L	Y	L	V	K	E	E	L	A	N	.	.	S	Y	V	I	D	A	D	N	Y	L	.	F	K	N	M	F	R	N	D	L	T	R	S	T	Y	F	S	V	Y	R	E	D	C	T	N	E	W	F	L	V	Y	G	D	D	Y	K	V	Q	D	I	I	V	D	S	K	A	G	R	I	L
Template Known Secondary structure		T	T	S		T							T	G	G	G		T	T	.	.						S	S				.	S	S					S				S																					T	T		B
Template Predicted Secondary structure																				.	.											.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
				133	.	.	.	.	.	.	140	.	.	.	.	.	.														.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	P	I	L	V	S	K	P	C	L	M	Q	A	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	N	V	T	N	M	R	Q	A	L	L	M	G	D	H	Y	S	V	E	I	E	N	A	E	I	I	L	D	I	D	T	P	D	D	F	I	T	A	K	E	R	Y	T
Query Conservation		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																																					.
Template Sequence		S	G	V	S	F	W	D	A	P	T	A	E	K	I	V	S	F	I	D	K	A	Y	V	S	G	E	F	V	D	L	Y	W	D	N	M	V	K	D	N	I	K	E	L	D	V	Y	V	E	E	L	E	.	G	N	S	I	Y	E	I	D	S	V	Q	D	Y	R	K	L	E	E	I	L	K
Template Known Secondary structure			S																							S			S	S			T	T					T	S	G	G	G										.	S	S						S	S											T
Template Predicted Secondary structure																																																					.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions