Return to main results Retrieve Phyre Job Id

Job DescriptionP63201
Confidence87.59%DateThu Jan 5 12:07:54 GMT 2012
Rank80Aligned Residues81
% Identity9%Templatec3geuC_
PDB info PDB header:cell adhesionChain: C: PDB Molecule:intercellular adhesion protein r; PDBTitle: crystal structure of icar from staphylococcus aureus, a member of the2 tetracycline repressor protein family
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170... .. ....180.........190.........200......
Predicted Secondary structure 













...








Query SS confidence 











































. .

.






























Query Sequence  LFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKL. . QD. ENTCFSKILLASRMSMARRLLELRQIPLHTI
Query Conservation             
   
        

  

    

   
 
 
..
 . 
 
    
   

  
  

  
  

 

Alig confidence 











































..

.






























Template Conservation 
   
  

 

  

   
    
   

  



  
 
 

 


 
                              
Template Sequence  SNAXKDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSKKSIYEQSVKCCFDYLNNIIXXNQNKSNYSIDAL
Template Known Secondary structure 

TTTT

TT

TT
S
TT

S
Template Predicted Secondary structure 


















Template SS confidence 















































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions