Job Description P63201 Confidence 49.65% Date Thu Jan 5 12:07:54 GMT 2012 Rank 377 Aligned Residues 54 % Identity 13% Template c2vz4A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional activator tipa; PDBTitle: the n-terminal domain of merr-like protein tipal bound to2 promoter dna Resolution 2.90 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.											.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Y	L	R	D	I	A	E	R	M	Y	T	S	E	S	L	I	K	K	K	L	Q	D	E	N	T	C	F	S	.	.	.	.	.	.	.	.	.	.	K	I	L	L	A	S	R	M	S	M	A	R	R	L	L	E	L	R	Q	I	P	L	H	T	I	A
Query Conservation																															.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																							.
Template Sequence		Y	S	V	G	Q	V	A	G	F	A	G	V	T	V	R	T	L	H	H	Y	D	D	I	G	L	L	V	P	S	E	R	S	H	A	G	H	R	R	Y	S	D	A	D	L	D	R	L	Q	Q	I	L	F	Y	.	R	E	L	G	F	P	L	D	E	V	A
Template Known Secondary structure		B										T													T	S	S			S				S	S					B															.			T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions