Job Description P63201 Confidence 31.10% Date Thu Jan 5 12:07:54 GMT 2012 Rank 495 Aligned Residues 89 % Identity 11% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	P	M	P	L	V	T	A	I	F	D	S	F	N	E	S	G	V	N	S	P	I	L	S	N	M	L	Y	L	S	C	L	S	M	F	S	H	K	K	E	L	I	P	L	L	F	N	S	I	S	T	V	S	G	K	V	E	R	L	I	S	F	D	I	A	K	R	W	Y	L	R	D	I	A	E	R	M	Y	T
Query Conservation
Alig confidence																																																								.	.
Template Conservation																																																								.	.
Template Sequence		T	L	F	D	Q	I	I	K	Q	F	N	L	A	D	Q	S	E	S	Q	M	I	P	K	D	S	K	E	F	L	N	L	M	M	Y	T	M	Y	F	K	N	I	I	K	K	H	L	T	L	S	F	V	E	F	T	.	.	I	L	A	I	I	T	S	Q	N	K	N	I	V	L	L	K	D	L	I	E	T	I	H	H
Template Known Secondary structure															T	T			S	S		S			S																							S	S							.	.							T	T	T	T												S	S	S
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	S	L	I	K	K	K	L	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	P	Q	T	V	R	A	L	N	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions