Job Description P0A6H5 Confidence 99.14% Date Thu Jan 5 11:03:09 GMT 2012 Rank 71 Aligned Residues 177 % Identity 19% Template c3pxgA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca121 and clpc1-485 complex Resolution 3.65 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	Q	D	N	A	K	R	S	V	A	I	A	L	R	N	R	W	R	R	M	Q	L	N	E	E	L	R	H	E	V	T	P	K	N	I	L	M	I	G	P	T	G	V	G	K	T	E	I	A	R	R	L	A	K	L	A	N	A	P	F	I	K	V	E	A	T	K	F	T	E	V	G	Y	V	G	K	E	V
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.													.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.													.
Template Sequence		V	I	G	R	S	K	E	I	Q	R	V	I	E	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	R	T	K	N	N	P	V	L	I	G	E	P	G	V	G	K	T	A	I	A	E	G	L	A	Q	Q	I	I	N	N	E	V	.	.	.	.	P	E	I	L	R	D	K	R	V	M	T	L	.
Template Known Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S							S		T	T	T	T	T													S	S		S	.	.	.	.		T	T	T	S	S							.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.													.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.															.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	I	I	R	D	L	T	D	A	A	V	K	M	V	R	V	Q	A	I	E	K	N	R	Y	R	A	E	E	L	A	E	E	R	I	L	D	V	L	I	P	P	A	K	N	N	W	G	Q	T	E	Q	Q	Q	E	P	S	A	A	R	Q	A	F	R	K	K	L	R	E	G	Q	L	D	D	K	E	I	E	I	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	R	L	K	K	V	M	D	E	I	R	Q	A	G	N	I	I	L	F	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	P	S	L	A	R	G	E	L	Q	C	I	G	A	T	T	L	D	E	Y	R	K	Y	I	E	K	D	A	A	L	E	R	R	F	Q	P	I	Q
Template Known Secondary structure			T	T										T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S	S	S									T	T	T	T					T	T		S					S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.																				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	A	P	M	G	V	E	I	M	A	P	P	G	M	E	E	M	T	S	Q	L	Q	S	M	F	Q	N	L	G	G	Q	K	Q	K	A	R	K	L	K	I	K	D	A	M	K	L	L	I	E	E	E	A	A	K	L	V	N	P	E	E	L	K	Q	D	A	I	D
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	Q	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	E	S	I	Q	I	L	Q	G	L	R	D	R	Y	E	A	H	H	R	V	S	I	T	D	D	A	I	E	A	A	V	K	L	S	D	R	Y	I	S	D	R	F	L	P	D	K	A	I	D
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	T	T	S	G	G	G	S	S		S																S	S			S		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.															.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions