Job Description P0A6H5 Confidence 97.54% Date Thu Jan 5 11:03:09 GMT 2012 Rank 228 Aligned Residues 90 % Identity 12% Template c3co5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative two-component system transcriptional response PDBTitle: crystal structure of sigma-54 interaction domain of putative2 transcriptional response regulator from neisseria gonorrhoeae Resolution 2.40 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	L	R	N	R	W	R	R	M	Q	L	N	E	E	L	R	H	E	V	T	P	K	N	I	L	M	I	G	P	T	G	V	G	K	T	E	I	A	R	R	L	A	K	L	A	N	A	P	F	I	K	V	E	A	T	K	F	T	E	V	G	Y	V	G	K	E	V	D	S	I	I	R	D	L	T	D	A	A
Query Conservation
Alig confidence																				.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	A	I	Q	E	X	N	R	E	V	E	A	A	A	K	R	T	.	.	.	.	.	S	P	V	F	L	T	G	E	A	G	S	P	F	E	T	V	A	R	Y	F	.	.	.	.	.	.	.	.	.	.	H	K	N	G	T	P	W	V	S	P	A	R	V	E	Y	L	I	D	X	P	X	E	L	L	Q	K	A
Template Known Secondary structure																	T		S	.	.	.	.	.	S								T	T									T	T	.	.	.	.	.	.	.	.	.	.			T	T	S						S	S	T	T													T
Template Predicted Secondary structure																				.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.											.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	M	V	R	V	Q	A	I	E	K	N	R	Y	R	A	E	E	L	A	E	E	R	I	L	D	V	L
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		E	G	.	.	.	G	V	L	Y	V	G	D	I	A	Q	Y	S	R	N	I	Q	T	G	I	T	F	I	I
Template Known Secondary structure		T	T	.	.	.	S								T	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		204	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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