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Job DescriptionP0A6H5
Confidence99.69%DateThu Jan 5 11:03:09 GMT 2012
Rank37Aligned Residues258
% Identity20%Templatec2c9oC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:ruvb-like 1; PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
Resolution2.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70..... ....80.........90....
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Query Sequence  IIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLAN. . APFIKVEATKFTEVGYVGK
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Template Sequence  LVGQENAREACGVIVE. . . . . . . . . LIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYS. . TEIK
Template Known Secondary structure  S
.........TT

TT


TTSS
TTS
GGGG

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   3940.........50.... .....60.........70.........80.........90.........100... ....
 
   95....100.........110. ........120.........130.........140.........150.........160......
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Query Sequence  EVDSIIRDLTDAAVKMV. . . . . . . . RVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREG
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Template Sequence  KTEVLMENFRRAIGLRIKETKKKEIIQDVTLHDLDVAGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRAL
Template Known Secondary structure  T

TT


TTS

GGG
B
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   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  QLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDA
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Template Sequence  ESSIAPIVIFASNRGNCVIRGTEDI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TSSS



S
BTTSS
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   320.........330.........340....
 
   247..250.........260.........270.........280.........290.........300.........310.........320......
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Query Sequence  VEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRL
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Template Conservation  ..................................................................     
   
  
 
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TSPHGIPLDLLDRV
Template Known Secondary structure  ..................................................................TT

TT
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   345....350........
 
   327..330.........340.........350.........360.........370.........380.........390.........400......
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Query Sequence  PIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEI
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Template Sequence  . MIIRTMLYTPQEMKQIIKIRAQT. . . . . . . . . . . . . EGINISEEALNHLGEIGTK. . . . . . . TTLRYSVQLLTPANLLA
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B
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T
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   359360.........370.........380. ........390.........400 .........410.......
 
   407..410.........420.........430...
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Query Sequence  SYDASDLSGQNITIDADYVSKHLDALV
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Template Sequence  KINGKDS. . . . . . IEKEHVEEISELFY
Template Known Secondary structure  TT
SS......B


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   418.420.... .....430........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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