Job Description P0A6H5 Confidence 99.38% Date Thu Jan 5 11:03:09 GMT 2012 Rank 51 Aligned Residues 141 % Identity 19% Template c2c99A_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:psp operon transcriptional activator; PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf Resolution 1.9 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.					.
Predicted Secondary structure																																																												.	.	.															.	.	.	.
Query SS confidence																																																												.	.	.															.	.	.	.
Query Sequence		I	I	G	Q	D	N	A	K	R	S	V	A	I	A	L	R	N	R	W	R	R	M	Q	L	N	E	E	L	R	H	E	V	T	P	K	N	I	L	M	I	G	P	T	G	V	G	K	T	E	I	A	R	R	L	A	K	L	A	.	.	.	N	A	P	F	I	K	V	E	A	T	K	F	T	E	.	.	.	.	V
Query Conservation																																																												.	.	.															.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.															.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	G	E	A	N	S	F	L	E	V	L	E	Q	V	S	.	.	.	.	.	.	.	.	.	.	.	.	H	L	A	P	L	D	K	P	V	L	I	I	G	E	R	G	T	G	K	E	L	I	A	S	R	L	H	Y	L	S	S	R	W	Q	G	P	F	I	S	L	N	C	A	A	L	N	E	N	L	L	D	S
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.			T	T	S		S								T	T	S	S											T	S	T	T	T	T	S							G	G	G	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.													.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	V	G	K	E	V	D	S	I	I	R	D	L	T	D	A	A	V	K	M	V	R	V	Q	A	I	E	K	N	R	Y	R	A	E	E	L	A	E	E	R	I	L	D	V	L	I	P	P	A	K	N	N	W	G	Q	T	E	Q	Q	Q	E	P	S	A	A	R	Q	A	F	R	K	K	L	R	E	G	Q	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	F	G	H	E	A	K	R	H	P	G	R	F	E	R	A	D	G	G	T	L	F	L	D	E	L	A	T	A	P	M	M	V	Q	E	K	L	L	R	V	I	E	Y	G	E	L	E	R	V	G	G	S	Q	P	L	Q	V	N	V	R	L	V	C	A	T	N	A	D	L	P	A	M	V	N	E	G	T	F	R
Template Known Secondary structure						B					B							T	T	T	S						S	G	G	G	S															S						S	S	S														S	S									T	S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions