Job Description P0A6H5 Confidence 99.37% Date Thu Jan 5 11:03:09 GMT 2012 Rank 53 Aligned Residues 107 % Identity 17% Template c1sxjC_ PDB info PDB header:replication Chain: C: PDB Molecule:activator 1 40 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	I	I	G	Q	D	N	A	K	R	S	V	A	I	A	L	R	N	R	W	R	R	M	Q	L	N	E	E	L	R	H	E	V	T	P	K	N	I	L	M	I	G	P	T	G	V	G	K	T	E	I	A	R	R	L	A	K	L	A	N	A	P	F	I	K	V	E	A	T	K	F	T	E	V	G	Y	V	G	K
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	V	Y	G	Q	N	E	V	I	T	T	V	R	K	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	K	L	P	H	L	L	F	Y	G	P	P	G	T	G	K	T	S	T	I	V	A	L	A	R	E	I	Y	G	K	N	Y	S	N	M	V	L	E	L	N	A	S	D	D	R	G	I
Template Known Secondary structure		G	G			S													.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										S	S	S	S	S														T	T	S										T	T	S			S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.															.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		95	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		E	V	D	S	I	I	R	D	L	T	D	A	A	V	.	.	.	K	M	V	R	V	Q	A	I	E	K	N	R	Y	R	A	E	E	L	A	E	E	R	I	L	D	V	L
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		D	V	V	R	N	Q	I	K	D	F	A	S	T	R	Q	I	F	S	K	G	F	K	L	I	I	L	D	E	A	D	A	M	T	N	A	A	Q	N	A	L	R	R	V	I
Template Known Secondary structure						T								S			S	S	S		S							T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions