Job Description P0A6H5 Confidence 99.61% Date Thu Jan 5 11:03:09 GMT 2012 Rank 41 Aligned Residues 150 % Identity 18% Template c1in8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:holliday junction dna helicase ruvb; PDBTitle: thermotoga maritima ruvb t158v Resolution 1.90 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	I	I	G	Q	D	N	A	K	R	S	V	A	I	A	L	R	N	R	W	R	R	M	Q	L	N	E	E	L	R	H	E	V	T	P	K	N	I	L	M	I	G	P	T	G	V	G	K	T	E	I	A	R	R	L	A	K	L	A	N	A	P	F	I	K	V	E	A	T	K	F	T	E	V	G	Y	V	G	K
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template Sequence		D	E	F	I	G	Q	E	N	V	K	K	K	L	S	L	A	L	E	.	.	.	.	.	.	.	.	.	A	A	K	M	R	G	E	V	L	D	H	V	L	L	A	G	P	P	G	L	G	K	T	T	L	A	H	I	I	A	S	E	L	Q	T	N	I	H	V	T	S	G	P	V	L	V	.	.	.	.	.	.	.
Template Known Secondary structure		G	G			S														.	.	.	.	.	.	.	.	.						T										S	S	T	T	S	S													T								T	T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	D	S	I	I	R	D	L	T	D	A	A	V	K	M	V	R	V	Q	A	I	E	K	N	R	Y	R	A	E	E	L	A	E	E	R	I	L	D	V	L	I	P	P	A	K	N	N	W	G	Q	T	E	Q	Q	Q	E	P	S	A	A	R	Q	A	F	R	K	K	L	R	E	G	Q	L	D	D	K	E	I	E
Query Conservation
Alig confidence		.	.	.																																									.	.	.																														.
Template Conservation		.	.	.																																									.	.	.																														.
Template Sequence		.	.	.	K	Q	G	D	M	A	A	I	L	T	S	L	E	R	G	D	V	L	F	I	D	E	I	H	R	L	N	K	A	V	E	E	L	L	Y	S	A	I	E	D	.	.	.	F	Q	I	D	I	Q	P	F	T	L	V	G	A	T	V	R	S	G	L	L	S	S	P	L	R	S	R	F	G	.	I	I	L	E
Template Known Secondary structure		.	.	.	S										T			T	T							T	G	G	G																.	.	.	S														S		G	G	G	S						T	T		S	.
Template Predicted Secondary structure		.	.	.																																									.	.	.																														.
Template SS confidence
					89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.
		175	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	L	A	A	A	P	M	G	V	E	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	F	Y	T	V	K	E	L	K	E	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions