Job Description P31547 Confidence 99.96% Date Thu Jan 5 11:48:06 GMT 2012 Rank 6 Aligned Residues 198 % Identity 19% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.													.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	R	G	V	W	E	T	L	A	M	T	F	V	S	G	F	F	G	F	V	I	G	L	P	V	G	V	L	L	Y	V	T	R	P	G	Q	I	I	A	N	A	K	L	Y	R	T	V	S	A	I	V	N	I	F	R	S	I	P	F	I	I	L	L	.	.	.	.	.	.	.	.	.	.	.	.	V	W	M	I
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G
Template Known Secondary structure																																T		S	S	S	T	T								T	T					S													T		S	S	S	S									T	S	S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	T	R	V	I	V	G	T	S	I	G	L	Q	A	A	I	V	P	L	T	V	G	A	A	P	F	I	A	R	M	V	E	N	A	L	L	E	I	P	T	G	L	I	E	A	S	R	A	M	G	A	T	P	M	Q	I	V	R	K	V	L	L	P	E	A	L	P	G	L	V	N	A	A	T	I	T	L	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F
Template Known Secondary structure						T	T	T	S																												G	G	G	S		T									T				S							T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.																.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		L	V	G	Y	S	A	M	G	G	A	V	G	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	Q	I	G	Y	Q	Y	G	Y	I	G	Y	.	.	.	N	A	T	V	M	N	T	V	L	V	L	L	V	I	L	V	Y	L	I	Q	F	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V
Template Known Secondary structure				T										S	S		S	B		S	S		S	S			B	S	S												T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions