Job Description P0A8V0 Confidence 99.90% Date Thu Jan 5 11:08:47 GMT 2012 Rank 21 Aligned Residues 229 % Identity 15% Template c3rpcD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:possible metal-dependent hydrolase; PDBTitle: the crystal structure of a possible metal-dependent hydrolase from2 veillonella parvula dsm 2008 Resolution 1.49 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	L	I	F	L	G	T	S	A	G	V	P	T	R	T	R	N	V	T	A	I	L	L	N	L	Q	H	P	T	Q	S	G	L	W	L	F	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	G	T	Q	H	Q	L	L	H	T	A	F	N	P
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.									.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																																												.	.	.	.	.	.	.
Template Sequence		T	Q	Y	T	H	I	R	.	.	.	.	.	.	.	.	.	.	.	N	A	T	G	K	L	T	I	.	.	.	.	K	N	T	T	F	L	I	D	P	F	L	A	P	K	D	T	Y	P	G	F	E	G	T	F	N	Y	Q	Q	R	X	P	X	V	D	L	P	L	S	X	D	D	L	L	.	.	.	.	.	.	.
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	T	T							.	.	.	.	T	T						S						T	T		B				T	T	B	T	T	T	T	S		B		S	S			S	S							.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																																												.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.												.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	D	K	I	F	I	S	H	L	H	G	D	H	L	F	G	L	P	G	L	L	C	S	R	S	M	S	G	I	I	Q	P	L	T	I	Y	G	P	Q	G	I	R	E	F	V	E	T	A	L	R	I	S	G	S	W	T	D	Y	P	L	E	I	V	E	I	G	A	G	E	I	L	D	D	G	L	R	K	V
Query Conservation
Alig confidence																					.	.	.	.	.												.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.												.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	V	T	A	V	V	V	T	H	T	H	L	D	H	W	D	D	T	.	.	.	.	.	A	I	N	S	I	P	K	S	L	P	I	.	F	V	Q	N	T	A	D	K	E	L	I	T	S	Q	G	F	I	D	V	R	I	I	.	.	.	.	.	.	.	.	.	.	.	F	E	S	L	E	F	N	G	I	T	L
Template Known Secondary structure		T	T							S				G	G	G	S				.	.	.	.	.					S		T	T	S			.			S	S										T	T		S						.	.	.	.	.	.	.	.	.	.	.	S	S					T	T
Template Predicted Secondary structure																					.	.	.	.	.												.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.												.	.	.	.	.	.	.	.	120	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	Y	P	L	E	H	P	L	E	C	Y	G	Y	R	I	E	E	H	D	K	P	G	A	L	N	A	Q	A	L	K	A	A	G	V	P	P	G	P	L	F	Q	E	L	K	A	G	K	T	I	T	L	E	D	G	R	Q	I	N	G	A	D	Y	L	A	A	P	V	P	G	K	A	L	A	I	F	G	D	T	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	T	G	G	S	H	G	T	V	E	X	Y	A	N	P	V	L	A	P	L	A	G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	G	V	I	F	E	A	A	D	E	P	T	V	Y	L	V	G	D	T	V
Template Known Secondary structure								S	S						T	S	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S								S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																																				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure												.	.																																																		.
Query SS confidence												.	.																																																		.
Query Sequence		P	C	D	A	A	L	D	L	A	K	.	.	G	V	D	V	M	V	H	E	A	T	L	D	I	T	M	E	A	K	A	N	S	R	G	H	S	S	T	R	Q	A	A	T	L	A	R	E	A	G	V	G	K	L	I	I	T	H	V	S	S	.	R	Y	D	D	K	G	C	Q	H	L	L	R	E	C	R	S	I	F
Query Conservation												.	.																																																		.
Alig confidence												.	.														.	.																																			.
Template Conservation																											.	.
Template Sequence		W	T	S	D	V	E	K	A	L	L	R	F	D	P	N	V	I	I	X	N	T	G	Y	A	Q	.	.	I	L	G	F	E	D	S	I	I	X	G	T	K	D	I	G	R	X	V	V	R	K	P	E	A	K	I	I	A	V	H	X	D	T	V	N	H	T	A	T	S	R	K	D	V	R	K	F	I	K	G	N	N
Template Known Secondary structure		S														S							S		B		.	.	B	T	T		S	S		S	S														T	T	S						S		S	S	S	S	S	B														T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		292	.			.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		P	A	.	.	T	E	L	A	N	D	F	T	V	F	N	V
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		I	E	S	H	V	A	V	P	E	D	G	E	T	I	T	L
Template Known Secondary structure			T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions