Job Description P0A8V0 Confidence 100.00% Date Thu Jan 5 11:08:47 GMT 2012 Rank 4 Aligned Residues 235 % Identity 23% Template c3md7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase-like; PDBTitle: crystal structure of a beta-lactamase-like protein bound to gmp from2 brucella melitensis Resolution 1.27 Å

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		1	.	.	.	.	.	.	.	.	10	.	.																	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		M	E	L	I	F	L	G	T	S	A	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	R	T	R	N	V	T	A	I	L	L	N	L	Q	H	.	P	T	Q	S	G	L	W	L	F	D	C	G	E	G	T	Q	H	Q	L	L	H	T	A	F	N	P	G	K	L	D	K	I	F	I	S
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																										.	.
Template Conservation																																																																								.	.
Template Sequence		L	R	F	T	L	L	G	C	G	S	S	P	G	V	P	R	I	N	G	D	W	G	K	C	D	P	K	N	P	K	N	R	R	R	R	A	S	L	L	V	E	R	Y	D	A	E	G	N	N	T	V	V	V	I	D	T	G	P	D	F	R	M	Q	M	I	D	S	G	V	H	.	.	M	L	D	A	A	V	Y	T
Template Known Secondary structure										B		T	T		B	S		T	T				T	T	S		T	T		G	G	G		B		B										T	T												T	T									T			.	.			S					S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.																						.	.	.	.
Query SS confidence																																															.	.	.	.	.																						.	.	.	.
Query Sequence		H	L	H	G	D	H	L	F	G	L	P	G	L	L	C	S	R	S	M	S	G	I	I	Q	P	L	T	I	Y	G	P	Q	G	I	R	E	F	V	E	T	A	L	R	I	S	.	.	.	.	.	G	S	W	T	D	Y	P	L	E	I	V	E	I	G	A	G	E	I	L	D	D	.	.	.	.	G	L	R	K	V
Query Conservation																																															.	.	.	.	.																						.	.	.	.
Alig confidence																							.	.																							.	.	.	.	.																						.	.	.	.
Template Conservation																							.	.
Template Sequence		H	P	H	A	D	H	I	H	G	I	D	D	L	R	T	Y	V	V	D	N	G	.	.	R	L	M	D	V	Y	A	N	R	L	T	R	N	R	L	Y	D	T	F	G	Y	C	F	E	T	P	V	G	S	S	Y	P	P	I	L	S	M	H	D	I	A	P	E	T	P	F	S	I	E	G	A	G	G	A	I	R	F
Template Known Secondary structure									T	T	G	G	G	G								T	.	.	S																			G	G	G	T	S			T	T														T	T								T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		135	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		T	A	Y	P	L	E	.	H	P	L	E	C	Y	G	Y	R	I	E	E	H	D	K	P	G	A	L	N	A	Q	A	L	K	A	A	G	V	P	P	G	P	L	F	Q	E	L	K	A	G	K	T	I	T	L	E	D	G	R	Q	I	N	G	A	D	Y	L	A	A	P	V	P	G	K	A	L	A	I	F	G	D	T
Query Conservation								.
Alig confidence								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	F	S	Q	V	H	G	D	I	E	S	L	G	F	R	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	V	Y	C	T	D	V
Template Known Secondary structure									T	T									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T						S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																																																							.	.	.	.	.	.	.	.
		214	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	P	.	C	D	A	A	L	D	L	A	K	G	V	D	V	M	V	H	E	A	T	L	D	I	T	M	E	A	K	A	N	S	R	G	H	S	S	T	R	Q	A	A	T	L	A	R	E	A	G	V	G	K	L	I	I	T	H	V	S	S	R	Y	D	D	K	G	C	Q	H	L	L	R	E	C	R	S	I	F	P
Query Conservation				.
Alig confidence				.																								.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.																																		.	.	.	.	.	.
Template Sequence		S	A	F	P	E	Q	S	L	Q	Y	I	K	D	A	D	V	L	I	I	G	A	L	Q	Y	R	P	.	.	.	.	.	.	H	P	S	H	F	S	L	G	E	A	L	E	W	I	E	K	L	S	P	K	R	A	I	L	T	H	M	H	V	P	L	D	Y	.	.	.	.	.	.	E	T	V	M	R	E	T	P	H
Template Known Secondary structure		S	B			G	G	G					T	T		S									S	S		.	.	.	.	.	.	B	T	T	B																S						S	B		T	T				.	.	.	.	.	.							S		T
Template Predicted Secondary structure																												.	.	.	.	.	.																																		.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	E	L	A	N	D	F	T	V	F	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	E	P	G	Y	D	G	L	R	F	E	V
Template Known Secondary structure		T						T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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