Job Description P0A8V0 Confidence 99.46% Date Thu Jan 5 11:08:47 GMT 2012 Rank 38 Aligned Residues 176 % Identity 18% Template c3lvzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:blr6230 protein; PDBTitle: new refinement of the crystal structure of bjp-1, a subclass b32 metallo-beta-lactamase of bradyrhizobium japonicum Resolution 1.40 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		R	N	V	T	A	I	L	L	N	L	Q	H	P	T	Q	S	G	L	W	L	F	D	C	G	E	G	.	.	.	.	.	T	Q	H	Q	L	L	H	T	A	F	N	P	G	K	L	D	K	I	F	I	S	H	L	H	G	D	H	L	F	G	L	P	G	L	L	C	S	R	S	M	S	G	I	I	Q	P	L	T	I
Query Conservation																												.	.	.	.	.
Alig confidence											.	.	.	.														.	.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation											.	.	.	.																																																											.	.	.	.	.	.	.
Template Sequence		D	G	I	A	V	Y	V	I	K	.	.	.	.	T	S	Q	G	L	I	L	M	D	T	A	M	P	Q	S	T	G	M	I	K	D	N	I	A	K	L	G	F	K	V	A	D	I	K	L	I	L	N	T	H	A	H	L	D	H	T	G	G	F	A	E	I	K	K	E	T	G	A	.	.	.	.	.	.	.	Q	L
Template Known Secondary structure		S	S	S							.	.	.	.		T	T										G	G	G											T	T			G	G	G							S			S					T	T											.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.																																																											.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.
		92	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		Y	G	P	Q	G	I	R	E	F	V	E	T	A	.	.	.	.	.	L	R	I	S	G	S	W	T	D	Y	P	L	E	I	V	E	I	G	A	G	E	I	L	D	D	G	L	R	K	V	T	A	Y	P	L	E	H	P	L	E	C	Y	G	Y	R	I	E	E	H	D	K	P	G	A	L	N	A	Q	A	L	K	A
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	G	E	R	D	K	P	L	L	E	G	G	Y	Y	P	G	D	E	K	N	E	D	L	A	F	P	A	V	K	V	D	R	A	V	K	E	G	D	R	V	T	L	G	D	T	T	L	T	A	H	A	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					G	G	G							T			T	T		T	T		G	G	G								S					T	T						T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		A	G	V	P	P	G	P	L	F	Q	E	L	K	A	G	K	T	I	T	L	E	D	G	R	Q	I	N	G	A	D	Y	L	A	A	P	.	.	.	.	V	P	G	K	A	L	A	I	F	G	D	T	G	P	C	D	A	A	L	D	L	A	K	G	V	D	V	M	V	H	E	A	T	L	D	I	T	M	E	A	K
Query Conservation																																					.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.															.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	S	P	G	C	T	S	W	E	M	T	V	K	D	G	K	E	D	R	E	V	L	F	F	C	S	G	T	V	.	.	.	.	.	.	.	.	.	A	L	N	R	L	V	G	Q	P	T	Y	A	G	I	V	D	D	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	T	T											T	T														.	.	.	.	.	.	.	.	.	T	T				S	S	S		S	S	T	T					.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																									176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	S	R	G	H	S	S	T	R	Q	A	A	T	L	A	R	E	A	G	V	G	K	L	I	I	T	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Y	R	A	T	F	A	K	A	K	A	M	K	I	D	V	L	L	G	P	H
Template Known Secondary structure		.	.	.	.	.	.	.	.											S			S					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions