Job Description P0A8V0 Confidence 99.30% Date Thu Jan 5 11:08:47 GMT 2012 Rank 46 Aligned Residues 170 % Identity 18% Template c2br6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aiia-like protein; PDBTitle: crystal structure of quorum-quenching n-acyl homoserine2 lactone lactonase Resolution 1.7 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	A	I	L	L	N	L	Q	H	P	T	Q	S	G	L	W	L	F	D	C	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	H	Q	L	L	H	T	A	F	N	P	G	K	L	D	K	I	F	I	S	H	L	H	G	D	H	L	F	G	L	P	G	L	L	C	S	R	S	M
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation									.	.	.	.																																																																.	.	.	.	.	.
Template Sequence		V	W	C	Y	L	L	E	.	.	.	.	T	E	E	G	P	I	L	V	D	T	G	M	P	E	S	A	V	N	N	I	L	P	K	M	T	E	E	D	R	I	V	N	I	L	K	R	V	G	Y	E	P	D	D	L	L	Y	I	I	S	S	H	L	H	F	D	H	A	G	G	N	G	A	F	.	.	.	.	.	.
Template Known Secondary structure									.	.	.	.		T	T									S		G	G	G	B	T						B		G	G	G	S									T			G	G	G		S					S			S					T	T	G	G	G		.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.																																																																.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	I	I	Q	P	L	T	I	Y	G	P	Q	G	I	R	E	F	V	E	T	A	L	R	I	S	G	S	W	T	D	Y	P	L	E	I	V	E	I	G	A	G	E	I	L	D	D	G	L	R	K	V	T	A	Y	P	L	E	H	P	L	E	C	Y	G	Y	R	I	E	E	H	D	K	P	G	A	L	N	A	Q
Query Conservation
Alig confidence		.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	T	N	T	P	I	I	V	Q	R	T	E	Y	E	A	A	L	H	R	E	E	Y	M	K	E	C	I	L	P	H	L	N	Y	K	I	I	E	G	D	Y	E	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	S	S	S													T	T		T	T			G	G	G	S		T	T	S							S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	A	A	G	V	P	P	G	P	L	F	Q	E	L	K	A	G	K	T	I	T	L	E	D	G	R	Q	I	N	G	A	D	Y	L	A	A	P	V	P	G	K	A	L	A	I	F	G	D	T	G	P	C	D	A	A	L	D	L	A	K	G	V	D	V	M	V	H	E	A	T	L	D	I	T	M	E	A	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	V	Q	L	L	Y	T	P	G	H	S	P	G	H	Q	S	L	F	I	K	T	E	Q	S	G	S	V	L	L	T	I	D	A	S	Y	T	K	E	N	F	E	D	E	V	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								S	S	S	T	T									T	T	T								T	T		S	S						S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		A	N	S	R	G	H	S	S	T	R	Q	A	A	T	L	A	R	E	A	.	.	.	G	V	G	K	L	I	I	T	H
Query Conservation																					.	.	.
Alig confidence		.																			.	.	.
Template Conservation		.
Template Sequence		.	A	G	F	D	P	E	L	A	L	S	S	I	K	R	L	K	E	V	V	K	K	E	K	P	I	I	F	F	G	H
Template Known Secondary structure		.			S																										S	S
Template Predicted Secondary structure		.
Template SS confidence
			206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions