Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9A9
Confidence31.54%DateThu Jan 5 11:09:47 GMT 2012
Rank355Aligned Residues42
% Identity26%Templated2gmga1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PF0610-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60....
Predicted Secondary structure 











Query SS confidence 













































Query Sequence  RLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDD
Query Conservation 
  

  
      
 

 

   
      

  



 
  
  
Alig confidence 










...
















.













Template Conservation 

 

 

   ...
 

 


  
 
    . 

 

 

 



Template Sequence  REKIIELLLEG. . . DYSPSELARILDMRGKG. SKKVILEDLKVISK
Template Known Secondary structure  TTTS...
B
TTSS


SS
.
Template Predicted Secondary structure 
...








.
Template SS confidence 













































   13......20... ......30.........40 .........50....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions