Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9A9
Confidence51.85%DateThu Jan 5 11:09:47 GMT 2012
Rank287Aligned Residues56
% Identity14%Templated2f2ea1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70..... ....80...
Predicted Secondary structure 

















.

Query SS confidence 




















































.







Query Sequence  LEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEG. GKSVFELT
Query Conservation 
  
      
 

 

   
      

  



 
  
   


       .    
   
Alig confidence 




















.....


























.







Template Conservation    

  
  
  

 

   
.....


   

 

  
   


 
       
 

 

Template Sequence  XLIVRDAFEGLTRFGEFQKSL. . . . . GLAKNILAARLRNLVEHGVXVAVPAESGSHQEYRLT
Template Known Secondary structure  TT

S.....


TTS
SSSS

Template Predicted Secondary structure 





.....











Template SS confidence 





























































   27..30.........40....... ..50.........60.........70.........80...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions