 |
Job Description | P0A9A9 | Confidence | 74.13% | Date | Thu Jan 5 11:09:47 GMT 2012 |
Rank | 232 | Aligned Residues | 49 |
% Identity | 16% | Template | d2dw4a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| SWIRM domain
|
Resolution | 2.30 |
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | K | I | L | E | V | L | Q | E | P | D | N | H | H | V | S | A | E | D | L | Y | K | R | L | I | D | M | G | E | E | I | G | L | A | T | V | Y | R | V | L | N | Q | F | D | D | A | G | I | V |
Query Conservation |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   | . |
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |
|
|
|
Template Sequence |   |
R | N | R | T | L | Q | L | W | L | D | N | P | K | I | Q | L | T | F | E | A | T | L | Q | Q | L | E | A | P | Y | N | S | . |
D | T | V | L | V | H | R | V | H | S | Y | L | E | R | H | G | L | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| T | T | B |
|
|
|  |  |  |  |  |  |  | S |
| T | T | G | G | G | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|