Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9A9
Confidence65.33%DateThu Jan 5 11:09:47 GMT 2012
Rank254Aligned Residues33
% Identity12%Templated2bgca1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50 .........60.........70
Predicted Secondary structure 






.



Query SS confidence 

















.



















Query Sequence  HVSAEDLYKRLIDMGEEI. GLATVYRVLNQFDDAGIVTR
Query Conservation 
 

 

   
      
.
  



 
  
   


  
Alig confidence 










.....

.



















Template Conservation   

  


  
.....
  






 
  
   


  
Template Sequence  NLTMQELGYSS. . . . . GIAHSSAVSRIISKLKQEKVIVY
Template Known Secondary structure 


T.....T


TTS
Template Predicted Secondary structure 


.....






Template SS confidence 






































   168.170........ .180.........190.........200.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions