Job Description P0A9A9 Confidence 26.69% Date Thu Jan 5 11:09:47 GMT 2012 Rank 403 Aligned Residues 71 % Identity 18% Template d1t6sa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ScpB/YpuH-like Resolution 1.95

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		M	T	D	N	N	T	A	L	K	K	A	G	L	K	V	T	L	P	R	L	K	I	L	E	V	L	Q	E	P	D	N	H	H	V	S	A	E	D	L	Y	K	R	L	I	D	M	G	E	E	I	G	L	A	T	V	Y	R	V	L	N	Q	F	D	D	.	.	.	.	A	G	I	V	T	R	H	N	F	E	G	G
Query Conservation																																																																		.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																							.	.	.																			.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		M	Q	E	Q	R	Q	Q	L	L	R	.	.	.	.	.	.	.	.	.	.	.	S	L	E	A	L	I	F	S	S	E	E	P	V	N	L	Q	T	L	S	Q	I	T	.	.	.	A	H	K	F	T	P	S	E	L	Q	E	A	V	D	E	L	N	R	D	Y	E	A	T	G	R	T	F	R	I	H	A	I	A	G
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.										S	S		B									T	.	.	.	T																							T		S							T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10												.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	F	E	L	T	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	R	F	L	T	E	P	E
Template Known Secondary structure									G	G
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions