Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9A9
Confidence95.73%DateThu Jan 5 11:09:47 GMT 2012
Rank71Aligned Residues71
% Identity18%Templated1s3ja_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  DNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFEL
Query Conservation       
   
 
 
 

  

  
      
 

 

   
      

  



 
  
   


           
  
Alig confidence 









..















..










.....

































Template Conservation           
..

  
   
  
    ..  
  


  
..... 
    

  
  
   
 
 
     
 
   
Template Sequence  EXLESXEKQG. . VTPAQLFVLASLKKHG. . SLKVSEIAERX. . . . . EVKPSAVTLXADRLEQKNLIARTHNTKDRRVIDL
Template Known Secondary structure  TT..

S.......TS
TTS
SS
TTS
Template Predicted Secondary structure 

..



..


.....










Template SS confidence 















































































   25....30.... .....40.........50 .........60. ........70.........80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions