 |
Job Description | P0A9A9 | Confidence | 38.47% | Date | Thu Jan 5 11:09:47 GMT 2012 |
Rank | 317 | Aligned Residues | 49 |
% Identity | 16% | Template | d1ldja3 |
SCOP info | Cullin homology domain
| Cullin homology domain
| Cullin homology domain
|
Resolution | 3.00 |
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | V | T | L | P | R | L | K | I | L | E | V | L | Q | E | P | D | N | H | H | V | S | A | E | D | L | Y | K | R | L | I | D | M | G | E | E | I | G | L | A | T | V | Y | R | V | L | N | Q | F | D | D | A | G | I | V |
Query Conservation |   |
  |
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |   |
|
|
|
|
|
|   |   |   | . | . |   |   |
|   |   |
|
|   |   |   |
| . | . | . | . | . |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
Template Sequence |   |
L | Q | A | S | T | F | Q | M | A | I | L | L | Q | Y | N | T | E | D | . |
. |
A | Y | T | V | Q | Q | L | T | D | S | T | . |
. |
. |
. |
. |
Q | I | K | M | D | I | L | A | Q | V | L | Q | I | L | L | K | S | K | L | L |
Template Known Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  | G | G | G | S | S | S | . | . |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
601 | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | |
|
. | 620 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|