Job Description P0A9A9 Confidence 74.64% Date Thu Jan 5 11:09:47 GMT 2012 Rank 231 Aligned Residues 48 % Identity 25% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		14	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure							.																														.	.	.	.	.
Query SS confidence							.																														.	.	.	.	.
Query Sequence		K	V	T	L	P	.	R	L	K	I	L	E	V	L	Q	E	P	D	N	H	H	V	S	A	E	D	L	Y	K	R	L	I	D	M	G	.	.	.	.	.	E	E	I	G	L	A	T	V	Y	R	V	L	N	Q	F	D
Query Conservation							.																														.	.	.	.	.
Alig confidence							.													.	.																.	.	.	.	.
Template Conservation																				.	.
Template Sequence		V	A	T	P	E	V	V	S	K	I	A	Q	Y	K	Q	E	C	P	.	.	S	I	F	A	W	E	I	R	D	R	L	L	S	E	G	V	C	T	N	D	N	I	P	S	V	S	S	I	N	R	V	L	R	N	L	A
Template Known Secondary structure		S	S																T	.	.	T													T	T	S	S		T	T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions