Job Description P0A9A9 Confidence 97.10% Date Thu Jan 5 11:09:47 GMT 2012 Rank 19 Aligned Residues 72 % Identity 18% Template c3cuoB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	N	N	T	A	L	K	K	A	G	L	K	V	T	L	P	R	L	K	I	L	E	V	L	Q	E	P	D	N	H	H	V	S	A	E	D	L	Y	K	R	L	I	D	M	G	E	E	I	G	L	A	T	V	Y	R	V	L	N	Q	F	D	D	A	G	I	V	T	R	H	N	F	E	G	G	K	S	V	F	E
Query Conservation
Alig confidence														.	.	.															.	.												.	.	.	.	.																										.
Template Conservation														.	.	.															.	.												.	.	.	.	.																										.
Template Sequence		E	Q	A	A	A	L	L	K	A	M	S	H	.	.	.	P	K	R	L	L	I	L	C	M	L	S	G	S	P	.	.	G	T	S	A	G	E	L	T	R	I	T	.	.	.	.	.	G	L	S	A	S	A	T	S	Q	H	L	A	R	M	R	D	E	G	L	I	D	S	Q	R	D	.	A	Q	R	I	L	Y	S
Template Known Secondary structure											T		S	.	.	.											T	T		S	.	.												.	.	.	.	.																		T	S							.	S	S
Template Predicted Secondary structure														.	.	.															.	.												.	.	.	.	.																										.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80
		82	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		81	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions