Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9A9
Confidence89.32%DateThu Jan 5 11:09:47 GMT 2012
Rank159Aligned Residues52
% Identity17%Templatec3bwgA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk; PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.....
Predicted Secondary structure 

















Query SS confidence 
























































Query Sequence  RLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEG
Query Conservation 
  

  
      
 

 

   
      

  



 
  
   


       
Alig confidence 
























.....


























Template Conservation     
  
 
 

 




 


   .....



 


 

  
   
 
    
 
Template Sequence  ETYIEEHQLQQGDKLPVLETLXAQF. . . . . EVSKSTITKSLELLEQKGAIFQVRGSG
Template Known Secondary structure  TT

TT
B


T.....T

TTSTTT
Template Predicted Secondary structure 











.....








Template SS confidence 
























































   12.......20.........30...... ...40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions