Job Description P0A9A9 Confidence 20.90% Date Thu Jan 5 11:09:47 GMT 2012 Rank 465 Aligned Residues 53 % Identity 15% Template c2zmeA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	E	V	L	Q	E	P	D	N	H	H	V	S	A	E	D	L	Y	K	R	L	I	D	M	G	E	E	I	G	L	A	T	V	Y	R	V	L	N	Q	F	D	D	A	G	I	V	T	R	H	N	F	E	G	G	K	S	V	F
Query Conservation
Alig confidence								.	.																.	.	.	.	.
Template Conservation								.	.																.	.	.	.	.
Template Sequence		V	V	L	Q	L	A	.	.	E	K	N	G	Y	V	T	V	S	E	I	K	A	S	L	.	.	.	.	.	K	W	E	T	E	R	A	R	Q	V	L	E	H	L	L	K	E	G	L	A	W	L	D	L	Q	A	P	G	E	A	H	Y
Template Known Secondary structure								.	.	T	T	T	S												.	.	.	.	.																	T	T	S					S	S	S	S	S	S
Template Predicted Secondary structure								.	.																.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions