Job Description P0A9A9 Confidence 20.45% Date Thu Jan 5 11:09:47 GMT 2012 Rank 471 Aligned Residues 56 % Identity 16% Template c2k6xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		G	L	K	V	T	L	P	R	L	K	I	L	E	V	L	Q	E	P	D	N	H	.	H	V	S	A	E	D	L	Y	K	R	L	I	D	M	G	E	E	I	G	L	A	T	V	Y	R	V	L	N	Q	F	D	D	A	G	I
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		G	S	H	M	P	Q	I	E	R	R	I	K	K	L	I	S	L	G	K	K	K	G	Y	I	T	Y	E	D	I	D	K	A	F	P	P	D	F	E	G	F	D	T	N	L	I	E	R	I	H	E	E	L	E	K	H	G	I
Template Known Secondary structure																							S	S		B									S		S		S	S																T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions