 |
Job Description | A5A607 | Confidence | 1.70% | Date | Thu Jan 5 10:55:15 GMT 2012 |
Rank | 89 | Aligned Residues | 19 |
% Identity | 26% | Template | c2kvlA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:major outer capsid protein vp7; |
PDBTitle: nmr structure of the c-terminal domain of vp7
|
Resolution | UNK |
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | Q | I | N | I | A | L | E | Q | K | . |
G | S | G | N | F | S | A | W |
Query Conservation |   |
|
|
|
|
|   |   |   |   |
|
| . |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|
|
|
|   |
|
|
|
|   |   |
|   |
Template Sequence |   |
V | N | Q | I | I | Q | L | M | S | K | R | S | R | S | L | N | S | A | A | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | G | G | G | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|