Job Description Q47158 Confidence 95.50% Date Thu Jan 5 12:36:36 GMT 2012 Rank 148 Aligned Residues 117 % Identity 14% Template c3p2fA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ahl synthase; PDBTitle: crystal structure of tofi in an apo form Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Q	P	G	D	F	Q	Q	L	C	A	I	F	I	R	A	V	T	M	T	A	S	Q	H	Y	S	P	Q	Q	I	S	A	W	A	Q	I	D	E	S	R	W	K	E	K	L	A	K	S	Q	V	W	V	A	I	I	N	A	Q	P	V	G	F	I	S	R	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	A	H	I	A	A	E	L	G	S	Y	R	Y	R	V	F	V	E	Q	L	K	M	E	R	D	Q	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	D	T	V	Y	V	L	G	R	D	A	N	G	E	I	C	G	C	A	R	L	L	P	T	T	R	P	Y	L	L	Q	E	V	F	P	H
Template Known Secondary structure																			T	T	T							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T									T	T	S											T	T	S									G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.															40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
														76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.														.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.														.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	H	Y	I	D	M	L	F	V	D	P	E	Y	T	R	R	G	V	A	S	A	L	L	K	P	L	I	K	S	E	S	E	L	T	V	D	A	.	.	.	.	.	S	I	T	A	K	P	F	F	E	R	Y	G	F	.	.	Q	T	V	K	Q	Q	R	V	E	C	R	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.																		.	.	.	.	.														.	.								.
Template Conservation																												.	.	.	.	.																																													.
Template Sequence		L	L	A	D	E	A	P	R	S	A	H	V	W	E	L	S	R	F	A	A	T	A	W	S	V	R	.	.	.	.	.	P	M	L	A	A	A	V	E	C	A	A	R	R	G	A	R	Q	L	I	G	V	T	F	C	S	M	E	R	M	F	R	R	I	G	V	H	A	H	R	A	G	A	P	V	.	S	I	D	G
Template Known Secondary structure		G		S	S						T	T												T	T			.	.	.	.	.												T	T	T		S																		T						S	S				.			T	T
Template Predicted Secondary structure																												.	.	.	.	.																																													.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.
		137	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	F	T	N	F	Y	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	V	V	A	C	W	I	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions