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Job DescriptionQ47158
Confidence99.83%DateThu Jan 5 12:36:36 GMT 2012
Rank23Aligned Residues125
% Identity19%Templatec3i9sA_
PDB info PDB header:transferaseChain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70...
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Query Sequence  NIQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQISAWAQIDESRWKEKLAKSQVWVAIINAQPVGFISR. . . . . . . . .
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Template Sequence  SVEIKRVDKHHCLDLVGIFIELERYYFGDKAASEQ. . DLANYLSHQVFSEHSGVKVIAAVEHDKVLGFATYTIXFPAPKL
Template Known Secondary structure 



GGGGGGGGGG


..TTTSTT


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GGG
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   2.......10.........20.........30...... ...40.........50.........60.........70.........
 
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Query Sequence  . IEHYIDMLFVDPEYTRRGVASALLKPLIKSESELTVDA. . . . . . . . SITAKPFFERYGFQTVKQ
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Template Sequence  SGQXYXKDLFVSSSARGKGIGLQLXKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIRE
Template Known Secondary structure 

GGGTTS
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   80.........90.........100.........110.........120.........130.........140....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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