Job Description Q47158 Confidence 99.42% Date Thu Jan 5 12:36:36 GMT 2012 Rank 120 Aligned Residues 125 % Identity 15% Template c3eo4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mj1062; PDBTitle: the crystal structure of a domain from methanocaldococcus jannaschii2 dsm 2661 Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		N	N	I	Q	I	R	N	Y	Q	P	G	D	F	Q	Q	L	C	A	I	F	I	R	A	V	T	M	T	A	S	Q	H	Y	S	P	Q	Q	I	S	A	W	A	Q	I	D	E	S	R	W	K	E	K	L	A	K	S	Q	V	W	V	A	I	I	N	A	Q	P	V	G	F	I	S	R	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.
Template Sequence		S	K	I	I	I	R	Q	I	T	D	N	D	L	E	L	L	X	A	W	R	S	N	P	L	I	Y	K	F	F	Y	I	Q	K	E	.	.	.	P	L	K	W	E	E	H	Y	S	W	W	X	S	R	E	N	R	V	D	W	I	I	L	L	R	E	N	N	T	I	R	K	V	G	S	V	N	V	S	Q	L	N	T
Template Known Secondary structure											G	G	G									T						T	T	S	T	T			S	.	.	.																S											T	T													T	T	S
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.				.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.
Query Sequence		I	E	H	Y	I	D	M	L	F	V	D	P	E	Y	T	R	R	G	V	A	S	A	L	L	K	P	L	I	K	S	E	S	E	L	T	V	D	A	.	.	.	.	.	.	.	.	S	I	T	A	K	P	F	F	E	R	Y	G	F	Q	T	V	K	Q
Query Conservation																																								.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	P	E	I	G	I	L	I	G	E	F	F	L	W	G	K	H	I	G	R	H	S	V	S	L	V	L	K	W	L	K	N	I	G	Y	K	K	A	H	A	R	I	L	E	N	N	I	R	S	I	K	L	F	E	S	L	G	F	K	K	T	K	K
Template Known Secondary structure		S	S									S	T	T	S	T	T	S	S																T	T										T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions