Job Description Q47158 Confidence 57.92% Date Thu Jan 5 12:36:36 GMT 2012 Rank 169 Aligned Residues 106 % Identity 17% Template c1lrzA_ PDB info PDB header:antibiotic inhibitor Chain: A: PDB Molecule:factor essential for expression of methicillin PDBTitle: x-ray crystal structure of staphylococcus aureus fema Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	I	Q	I	R	N	Y	Q	P	G	D	F	Q	Q	L	C	A	I	F	I	R	A	V	T	M	T	A	S	Q	H	Y	S	P	Q	Q	I	S	A	W	A	Q	I	D	E	S	R	W	K	E	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	V	K	V	R	F	L	S	E	E	E	L	P	I	F	R	S	F	M	D	D	K	F	Y	Y	N	R	L	K	Y	Y	K	D	R	V	L	V	P	L	A	Y	I	N	F	D	E	Y	I	K	E	L	N	E	E	R	D	I	L	N	K	D	L	N	K	A	L	K	D	I	E	K	R	P	E	N	K	K	A	H
Template Known Secondary structure		S	S								G	G	G																					G	G	G																																							T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
																												54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	S	Q	V	W	V	A	I	I	N	A	Q	P	V	G	F	I	S	R	I	E	H	Y	I	D	M	L	F	V	D	P	E	Y	T	R	R	G	V	A	S	A	L	L	K	P	L	I	K	S	E	S	E	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		N	K	R	D	N	L	Q	Q	Q	L	D	A	N	E	Q	K	I	E	E	G	K	R	L	Q	E	E	H	G	N	E	L	P	I	S	.	.	.	.	A	G	F	F	F	I	N	P	F	E	V	V	Y	Y	A	G	G	T	S	N	A	F	R	H	F	A	G	S	Y	A	V	Q	W	E	M	I	N	Y	A	L	N	H
Template Known Secondary structure																														S						.	.	.	.								S	S											G	G	G	G	G	G																	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.					.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		108	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	D	R
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions