Return to main results Retrieve Phyre Job Id

Job DescriptionP76535
Confidence56.14%DateThu Jan 5 12:24:03 GMT 2012
Rank110Aligned Residues97
% Identity15%Templated1zpda2
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase Pyr module
Resolution1.86

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80...... ...90.........100.........110.........120.......
Predicted Secondary structure 




...















Query SS confidence 



































. . .








































Query Sequence  AIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPP. . . TYGVKPGLVVGLIAGGEYAIQHAVEGAEDSREGGVNDLKNI
Query Conservation   
  
   
   


   
 
 

 

   
  
  ...

      
   



        
  

            
Alig confidence 



































...



















.....................
Template Conservation   

 
   
   

  


 

     
  

     
  
  
 
  
  

 



 .....................
Template Sequence  VGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARA. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
S


TTTT
TTS
SS.....................
Template Predicted Secondary structure 














.....................
Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60...
 
   128.130.........140.........150.........160.........170.
Predicted Secondary structure 


















Query SS confidence 











































Query Sequence  NLTAQDVVVGIAASGRTPYVIAGLEYARQLGCRTVGISCNPGSA
Query Conservation   
   
 

 

 

 
  
   
  
   
   
 

    
 
Alig confidence  ...








































Template Conservation  ...

    
 
 


  
    
  
     


 
 
     
Template Sequence  . . . KGAAAAVVTYSVGALSAFDAIGGAYAENLPVILISGAPNNN
Template Known Secondary structure  ...S

TTTTTT



GG
Template Predicted Secondary structure  ...













Template SS confidence 











































   64.....70.........80.........90.........100....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions