 |
Job Description | P76535 | Confidence | 75.80% | Date | Thu Jan 5 12:24:03 GMT 2012 |
Rank | 76 | Aligned Residues | 105 |
% Identity | 12% | Template | d1efva2 |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| C-terminal domain of the electron transfer flavoprotein alpha subunit
|
Resolution | 2.10 |
|
 |
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | G | G | G | R | L | I | Y | L | G | A | G | T | S | G | R | L | G | I | L | D | A | S | E | C | P | P | T | Y | G | V | K | P | G | L | V | V | G | L | I | A | G | G | E | Y | A | I | Q | H | A | V | E | G | A | E | D | S | R | E | G | G | V | N | D | L | K | N | I | N | L | T | A | Q | D | V | V | V | G | I |
Query Conservation |   |
|   |   |   |
|
|
|   |   |   |
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|
|   |
|
|
|   |
|
|   |
|
|   |
|   |   |   |
|
|
|   |
|
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|   |
Template Sequence |   |
L | T | G | A | K | V | V | V | S | G | G | R | G | L | K | S | G | E | N | F | K | L | L | Y | D | L | A | D | Q | L | H | A | A | V | G | A | S | R | A | A | V | D | A | G | F | V | P | N | D | M | Q | V | G | Q | T | G | K | I | V | A | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | L | Y | I | A | V |
Template Known Secondary structure |   |
G | G | G |
| S |  |  |  |  |  |
| G | G | G |
| S | T | G | G | G |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
|  |  |  |  |  | T | T | S | S |
| G | G | G | B | B | S | T | T | S | B |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . |
  |
  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | S | G | R | T | P | Y | V | I | A | G | L | E | Y | A | R | Q | L | G | C | R | T | V | G | I | S | C | N | P | G | S | A | V | S | T | T | A | E | F | A | I | T |
Query Conservation |   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|   |   |
|
| . | . | . | . |   |   |
|   |   | . |
|
|
|
|
|   |
|   |   |
|
|
|
|   |   |
|
|
|
|
|
|
Template Sequence |   |
G | I | S | G | A | I | Q | H | L | A | G | M | . |
. |
. |
. |
K | D | S | K | T | . |
I | V | A | I | N | K | D | P | E | A | P | I | F | Q | V | A | D | Y | G | I | V |
Template Known Secondary structure |   |
S |
|
|
|
|  |  |  |  | T | T | T | . | . | . | . | T | T |
| S |  | . |  |  |  |  |  | S |
| T | T |
| G | G | G | G | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|  | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
279 | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
. | . | . | . | . | |
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|