Job Description P76535 Confidence 99.87% Date Thu Jan 5 12:24:03 GMT 2012 Rank 23 Aligned Residues 228 % Identity 15% Template c3odpA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative tagatose-6-phosphate ketose/aldose isomerase; PDBTitle: crystal structure of a putative tagatose-6-phosphate ketose/aldose2 isomerase (nt01cx_0292) from clostridium novyi nt at 2.35 a3 resolution Resolution 2.35 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.																															.	.	.	.	.
Query SS confidence																.	.	.	.																															.	.	.	.	.
Query Sequence		A	E	I	D	R	V	S	T	L	E	M	C	R	I	.	.	.	.	I	N	D	E	D	K	T	V	P	L	A	V	E	R	V	L	P	D	I	A	A	A	I	D	V	I	H	A	Q	V	.	.	.	.	.	S	G	G	G	R	L	I	Y	L	G	A	G	T	S	G	R	L	G	I	L	D	A	S	E	C	P	P
Query Conservation																.	.	.	.																															.	.	.	.	.
Alig confidence																.	.	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		K	N	L	L	G	Y	S	E	D	Y	L	K	E	R	K	G	Y	I	T	A	K	E	I	C	N	Q	P	K	L	W	R	E	T	Y	E	I	I	L	S	Q	R	E	K	L	K	S	F	L	D	N	F	A	K	K	P	N	A	K	I	V	I	T	G	A	G	S	S	A	F	V	G	N	S	V	V	S	Y	L	N	A
Template Known Secondary structure					T	T									T	T										T																												T	S	T	T								S	T								T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		T	Y	G	V	K	P	G	L	V	V	G	L	I	A	G	G	E	Y	A	I	Q	H	A	V	E	G	A	E	D	S	R	E	G	G	V	N	D	L	K	N	I	N	L	T	A	Q	D	V	V	V	G	I	A	A	S	G	R	T	P	Y	V	I	A	G	L	E	Y	A	R	Q	L	G	.	.	C	R	T	V	G	I
Query Conservation																																																																										.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	N	I	K	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	A	T	T	D	I	V	S	H	P	F	Y	Y	L	K	K	D	E	P	T	L	L	I	S	C	A	R	S	G	N	S	P	E	S	T	A	A	V	T	L	A	E	K	I	V	D	D	I	S	H	L	I	I
Template Known Secondary structure			S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T		G	G	G	T			T	T	S									S	S	S																	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.																				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		S	C	N	P	G	S	A	V	S	T	T	A	E	.	.	.	.	.	.	F	A	I	T	P	I	V	G	A	E	V	V	T	G	S	S	R	M	K	A	G	T	A	Q	K	L	V	L	N	M	L	S	T	G	L	M	I	K	S	G	K	V	F	G	N	L	M	V	D	V	V	A	T	N	E	K	L	H	V	R	Q
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	C	N	S	E	G	K	L	A	L	H	A	K	R	N	Y	N	S	F	L	L	L	X	P	E	E	S	N	D	K	G	F	A	X	T	.	.	G	S	F	S	T	X	L	L	S	C	L	L	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	D	K	L	E	S	I	G	K	Q	I	E	S	I
Template Known Secondary structure			S		T	T	S					G	G	G	S	S	S									G	G	G	S			S	S	S		S	.	.													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																																					.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.															.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	I	V	K	N	A	T	G	C	S	A	E	Q	A	E	A	A	L	I	A	C	E	R	N	C	K	T	A	I	V	M	V	L	K	N	L	D	A	A	E	A	K	K
Query Conservation
Alig confidence																											.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		S	X	Q	G	E	K	V	L	V	N	N	V	E	L	X	K	K	I	V	G	E	K	F	K	R	.	.	.	.	T	V	Y	L	G	A	A	N	A	F	G	L	A	K	E
Template Known Secondary structure												T									T	T			S		.	.	.	.							T
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions