Return to main results Retrieve Phyre Job Id

Job DescriptionP76535
Confidence22.01%DateThu Jan 5 12:24:03 GMT 2012
Rank239Aligned Residues102
% Identity11%Templatec3lq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- PDBTitle: crystal structure of 2-succinyl-6-hydroxy-2,4-cyclohexadiene2 1-carboxylic acid synthase/2-oxoglutarate decarboxylase3 from listeria monocytogenes str. 4b f2365
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.........80......... 90.........100.........110.........120....
Predicted Secondary structure 






...












Query SS confidence 









































. . .


































Query Sequence  IAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYG. . . VKPGLVVGLIAGGEYAIQHAVEGAEDSREGGVNDL
Query Conservation 
   
  
   
   


   
 
 

 

   
  
  

 ...     
   



        
  

         
Alig confidence 









































...
















..................
Template Conservation      
 

   
   

  


 

     
  

     
  
   

  

 

 



 ..................
Template Sequence  LTDYLAAFIEELVQAGVKEAIISPGSRSTPLALMMAEHPILKIYVDVDERSAGFFALGLAKA. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT




TTT
SS

SS..................
Template Predicted Secondary structure 
















..................
Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........
 
   125....130.........140.........150.........160.........170..
Predicted Secondary structure 



















Query SS confidence 















































Query Sequence  KNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCRTVGISCNPGSAV
Query Conservation      
   
 

 

 

 
  
   
  
   
   
 

    
 
Alig confidence  .....










































Template Conservation  .....

   
   
 


  
   

  
     




 
      
Template Sequence  . . . . . SKRPVVLLCTSGTAAANYFPAVAEANLSQIPLIVLTADRPHEL
Template Known Secondary structure  .....



SSTTTT



GGG
Template Predicted Secondary structure  .....












Template SS confidence 















































   70.........80.........90.........100.........110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions