Job Description P76535 Confidence 30.08% Date Thu Jan 5 12:24:03 GMT 2012 Rank 183 Aligned Residues 102 % Identity 16% Template c3lk7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine--d-glutamate ligase; PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a Resolution 1.50 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	G	G	R	L	I	Y	L	G	A	G	T	S	G	R	L	G	I	L	D	A	S	E	C	P	P	T	Y	G	V	K	P	G	L	V	V	G	L	I	A	G	G	E	Y	A	I	Q	H	A	V	E	G	A	E	D	S	R	E	G	G	V	N	D	L	K	N	I	N	L	T	A	Q	D	V	V	V	G	I	A	.
Query Conservation																																																																																	.
Alig confidence																																																													.	.	.	.	.	.	.														.
Template Conservation																																																													.	.	.	.	.	.	.
Template Sequence		E	N	K	K	V	L	V	L	G	L	A	R	S	G	E	A	A	A	R	L	L	A	K	L	G	A	I	V	T	V	N	D	G	K	P	F	D	E	N	P	T	A	Q	S	L	L	E	E	G	I	K	V	V	C	G	S	H	P	L	.	.	.	.	.	.	.	E	L	L	D	E	D	F	C	Y	X	I	K	N	P
Template Known Secondary structure		T	T									T	T	T											T	T								S	S		G	G	G										T	T						S				G	.	.	.	.	.	.	.	G	G	G	G	S									T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.	.	70	.	.	.	.	.	.	.	.	.	80
			140	.	.	.	.	.	.	.	.	.	150	.	.	.												.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	S	G	R	T	P	Y	V	I	A	G	L	E	Y	.	.	.	.	.	.	.	.	.	.	.	A	R	Q	L	G	C	R	T	V	G	I	S	C	N	P	G
Query Conservation		.															.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	P	Y	N	N	P	X	V	K	K	A	L	E	K	Q	I	P	V	L	T	E	V	E	L	A	Y	L	V	S	E	S	Q	L	I	G	I	T	G	S	N	G
Template Known Secondary structure		T	S		T	T	S									T	T																S								S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions