Job Description P76535 Confidence 95.53% Date Thu Jan 5 12:24:03 GMT 2012 Rank 60 Aligned Residues 138 % Identity 11% Template c3izbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein rps0 (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome Resolution NULL Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	R	V	L	P	D	I	A	A	A	I	D	V	I	H	A	Q	V	S	G	G	G	R	L	I	Y	L	G	A	G	T	S	G	R	L	G	I	L	D	A	S	E	C	P	P	T	Y	G	V	K	P	G	L	V	V	G	L	I	A	G	G	E	Y	A	I	Q	H	A	V	E	G	A	E	D	S	R	E	G	G
Query Conservation
Alig confidence																			.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	K	T	W	E	K	L	V	L	A	A	R	I	I	A	A	.	I	P	N	P	E	D	V	V	A	I	S	S	R	T	F	G	Q	R	A	V	L	K	F	A	A	H	T	G	A	T	P	I	A	G	R	F	T	P	G	S	F	T	N	Y	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			.			S	S									S	T	T	T												T						S	S			S	S	T	T	T	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	L	K	N	I	N	L	T	A	Q	D	V	V	V	G	I	A	A	S	G	R	T	P	Y	V	I	A	G	L	E	Y	A	R	Q	L	G	C	R	T	V	G	I	S	C	N	P	G	S	A	V	S	T	T	A	E	F	A	I	T	P	I	V	G	A	E	V	V	T	G	S	S	R	M	K	A	G	T	A
Query Conservation
Alig confidence		.	.	.	.	.	.																			.	.	.	.																										.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																			.	.	.	.																										.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	R	S	F	K	E	P	R	L	V	I	V	T	D	P	R	S	D	A	.	.	.	.	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L	T	D	L	D	S	P	S	E	F	.	.	V	D	V	A	I	P	C	N	N	.	.	.	.	.	.	.	.	.	.	.	R	G	K	H	S
Template Known Secondary structure		.	.	.	.	.	.	S		S	S			S					S		T	T	T	T		.	.	.	.										T									T	T	S		S	T	T	.	.		S							S	.	.	.	.	.	.	.	.	.	.	.	S	S	T
Template Predicted Secondary structure		.	.	.	.	.	.																			.	.	.	.																										.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.												.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	L	V	L	N	M	L	S	T	G	L	M	I	K	S	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	L	I	W	Y	L	L	A	R	E	V	L	R	L	R	G	A
Template Known Secondary structure																T	T	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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