Job Description P76535 Confidence 99.91% Date Thu Jan 5 12:24:03 GMT 2012 Rank 10 Aligned Residues 213 % Identity 15% Template c3fj1A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerase; PDBTitle: crystal structure of putative phosphosugar isomerase (yp_167080.1)2 from silicibacter pomeroyi dss-3 at 1.75 a resolution Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		I	I	N	D	E	D	K	T	V	P	L	A	V	E	R	V	L	P	D	I	A	A	A	I	D	V	I	H	A	.	.	Q	V	S	G	G	G	R	L	I	Y	L	G	A	G	T	S	G	R	L	G	I	L	D	A	S	E	C	P	P	T	Y	G	V	K	P	G	L	V	V	G	L	I	A	G	G	E	Y	A	I
Query Conservation																															.	.
Alig confidence																															.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	X	R	R	E	I	D	E	I	P	E	A	V	Q	R	L	L	D	H	G	A	Q	D	V	A	R	V	A	A	V	L	R	L	R	D	P	S	F	V	A	T	V	A	R	G	S	S	D	H	V	C	T	Y	L	S	Y	A	A	E	L	L	L	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																						S								T																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	A	V	E	G	A	E	D	S	R	E	G	G	V	N	D	L	K	N	I	N	L	T	A	Q	D	V	V	V	G	I	A	A	S	G	R	T	P	Y	V	I	A	G	L	E	Y	A	R	Q	L	G	C	R	T	V	G	I	S	C	N	P	G	S	A	V	S	T	T	A	E	F	A	I	T	P	I	V	G	A
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	V	A	S	L	G	P	S	V	A	S	V	Y	D	A	R	L	R	L	D	R	A	L	C	L	A	V	S	Q	S	G	K	S	P	D	I	V	A	X	T	R	N	A	G	R	D	G	A	L	C	V	A	L	T	N	D	A	A	S	P	L	A	G	V	S	A	H	T	I	D	I	H	A	G	P
Template Known Secondary structure		.	.	.	.	.	.						T					T	T							T	T								S	S	S															T	T								S		T	T	S					T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	V	T	G	S	S	R	M	K	A	G	T	A	Q	K	L	V	L	N	M	L	S	T	G	L	M	I	K	S	G	K	V	F	G	N	L	M	V	D	V	V	A	T	N	E	K	L	H	V	R	Q	V	N	I	V	K	N	A	T	G	C	S	A	E	Q	A	E	A	A	L	I	A	C	E	R	N	C	K	T
Query Conservation
Alig confidence									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Conservation									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Sequence		E	L	S	V	A	A	T	.	.	K	T	F	V	T	S	A	V	A	G	L	X	L	L	A	D	W	A	E	D	D	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	A	L	G	N	L	P	E	T	L	A	A	A	S	R	I	D	W	P	E	X	R	V	A	I	G	A	R	P	S	.	.	.	.
Template Known Secondary structure				S	T	T			.	.																			T					.	.	.	.	.	.	.	.	.	.	.	.	.						T										T													S			.	.	.	.
Template Predicted Secondary structure									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.														.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	M	V	L	K	N	L	D	A	A	E	A	K	K
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	L	F	T	L	G	R	G	T	S	L	A	V	S	N	E
Template Known Secondary structure		.							G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			207	.	.	210	.	.	.	.	.	.	.	.	.	220	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions