Return to main results Retrieve Phyre Job Id

Job DescriptionP76535
Confidence99.91%DateThu Jan 5 12:24:03 GMT 2012
Rank12Aligned Residues171
% Identity18%Templatec2xhzC_
PDB info PDB header:isomeraseChain: C: PDB Molecule:arabinose 5-phosphate isomerase; PDBTitle: probing the active site of the sugar isomerase domain from e. coli2 arabinose-5-phosphate isomerase via x-ray crystallography
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40........ .50.........60.........70.........80.........90.........100...
Predicted Secondary structure  .











Query SS confidence 























.






















































Query Sequence  EMCRIINDEDKTVPLAVERVLPDI. AAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGGE
Query Conservation       
      
  

   
  
.   
  
   
   


   
 
 

 

   
  
  

      
   



 
Alig confidence 























.






































................
Template Conservation 
              

      
          
     

 
 
 
 
   
      
   ................
Template Sequence  DFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATFAST. . . . . . . . . . . . . . . .
Template Known Secondary structure 
GGGSST
SS

................
Template Predicted Secondary structure 









................
Template SS confidence 















































































   11........20.........30.........40.........50.........60.........70....
 
   104.....110.........120.........130.........140.........150.........160.........170.........180...
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  YAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCRTVGISCNPGSAVSTTAEFAITPI
Query Conservation         
  

             
   
 

 

 

 
  
   
  
   
   
 

    
 
   

  
   
Alig confidence  ......









































































Template Conservation  ......
                      



 

 

 
   
     

  

 

 

    
 
   

  
   
Template Sequence  . . . . . . GTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVK
Template Known Secondary structure  ......T



TTSTT

TT

SSS

TTT

S
TTSSSS

Template Predicted Secondary structure  ......



























Template SS confidence 















































































   75....80.........90.........100.........110.........120.........130.........140........
 
   184.....190...... ...200.........210.......
Predicted Secondary structure 











.
Query SS confidence 












.




















Query Sequence  VGAEVVTGSSRMK. AGTAQKLVLNMLSTGLMIKSG
Query Conservation   
 
     
  
.  

    
  

       
Alig confidence 












.




















Template Conservation     
          
    
 
 
 
   
   

Template Sequence  VAKEACPLGLAPTSSTTATLVMGDALAVALLKARG
Template Known Secondary structure 
S

SSTT
SS



Template Predicted Secondary structure 












Template SS confidence 


































   149150.........160.........170.........180...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions