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Job DescriptionP76535
Confidence24.90%DateThu Jan 5 12:24:03 GMT 2012
Rank212Aligned Residues128
% Identity13%Templatec2w8wA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser
Resolution2.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40....... ..50.........60.........70.........80.........90.........
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Query Sequence  TVPLAVERVLPD. . . . . . . . . . . . . . . . IAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLI
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Template Sequence  DVIAAGKEALEKFGSGTYGSRMLNGTFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASI
Template Known Secondary structure 
S


SBTTTTT

T
SS
S
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TT

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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   100.........110.........120.........130.........140. ........150.........160...
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Query Sequence  AGGEYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAAS. . . . GRTPYVIAGLEYARQLGCRTVG
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Template Sequence  YDGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLV
Template Known Secondary structure  S
S
TT
S
SSS
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   163......170.........180.........190.........200.........210.........220.........230
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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