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Job DescriptionP76535
Confidence24.36%DateThu Jan 5 12:24:03 GMT 2012
Rank221Aligned Residues129
% Identity13%Templatec2po3B_
PDB info PDB header:transferaseChain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40...... ...50.........60.........70.........80.........90.........100.....
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Query Sequence  DKTVPLAVERVLP. . . . . . . . DIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGGEYA
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Template Sequence  RARLYERLDRALDSQWLSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAGLTGEVIMPSMTFAATPHALRWI
Template Known Secondary structure  T

SSS
TSSS
T

SSSS
TT
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   2031........2040.........2050.........2060.........2070.........2080.........2090.........2100.........2110
 
   106...110... ......120.........130.........140.........150.........160..
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Query Sequence  IQHAVEGA. . EDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCRTV
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Template Conservation 
                                  
  
       
  

       
Template Sequence  GLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVHLWGRPCAADQLRKVADEHGLRLY
Template Known Secondary structure  T

B
TTTSSB
STT

TT
GGG



T
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   2111........2120.........2130.........2140.........2150.........2160.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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