Return to main results Retrieve Phyre Job Id

Job DescriptionP16684
Confidence38.50%DateThu Jan 5 11:35:30 GMT 2012
Rank442Aligned Residues45
% Identity13%Templated2oi8a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20..... ....30.........40.........50..
Predicted Secondary structure 








.














Query SS confidence 





















.


























Query Sequence  STHPTSYPTRYQEIAAKLEQEL. RQHYRCGDYLPAEQQLAARFEVNRHTL
Query Conservation            
 

   
   
. 
 
 

 




 


   



 

Alig confidence 





















.




...

.















Template Conservation 


       
  

 

  
    
  ...  .
   

  



  

Template Sequence  TPRERYRTQVRAEIKDHAWEQIATAGAS. . . AL. SLNAIAKRXGXSGPAL
Template Known Secondary structure 

SS


TT...S
.
TT

Template Predicted Secondary structure 





...

.



Template SS confidence 

















































   8.10.........20.........30..... .. ..40.........50...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions