 |
Job Description | P16684 | Confidence | 38.50% | Date | Thu Jan 5 11:35:30 GMT 2012 |
Rank | 442 | Aligned Residues | 45 |
% Identity | 13% | Template | d2oi8a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
Resolution | 2.50 |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | T | H | P | T | S | Y | P | T | R | Y | Q | E | I | A | A | K | L | E | Q | E | L | . |
R | Q | H | Y | R | C | G | D | Y | L | P | A | E | Q | Q | L | A | A | R | F | E | V | N | R | H | T | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
| . |   |
|   |
|   |
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   | . | . | . |   |   | . |
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|
Template Sequence |   |
T | P | R | E | R | Y | R | T | Q | V | R | A | E | I | K | D | H | A | W | E | Q | I | A | T | A | G | A | S | . |
. |
. |
A | L | . |
S | L | N | A | I | A | K | R | X | G | X | S | G | P | A | L |
Template Known Secondary structure |   |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | . | . | . | S |
| . |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
. | . | |
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|