Return to main results Retrieve Phyre Job Id

Job DescriptionP16684
Confidence91.20%DateThu Jan 5 11:35:30 GMT 2012
Rank199Aligned Residues57
% Identity16%Templatec1wsuA_
PDB info PDB header:translation/rnaChain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20..... ....30.........40.........50.........60.........70....
Predicted Secondary structure  .




















Query SS confidence 











.
















































Query Sequence  YQEIAAKLEQEL. RQHYRCGDYLPAEQQLAARFEVNRHTLRRAIDQLVEKGWVQRRQGVGVL
Query Conservation 
 

   
   
. 
 
 

 




 


   



 


 

  
   


    
 

 
Alig confidence 











.




....







































Template Conservation 
      
       
  ....

   
               
  
   
 

 
      
Template Sequence  QKKLLKDLEDKYRVSRWQ. . . . PPSFKEVAGSFNLDPSELEELLHYLVREGVLVKINDEFYW
Template Known Secondary structure  TTS....

BT

TTS
SSSB
Template Predicted Secondary structure 



....












Template SS confidence 





























































   515....520.........530.. .......540.........550.........560.........570..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions