Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9Q9
Confidence98.02%DateThu Jan 5 11:11:02 GMT 2012
Rank112Aligned Residues158
% Identity12%Templatec3m2tA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of dehydrogenase from chromobacterium2 violaceum
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10...... ...20.........30.........40.........50.........60.... .....70........
Predicted Secondary structure 




.




















.






Query SS confidence 















.















































.













Query Sequence  MKNVGFIGWRGMVGSV. LMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALK. ALDIIVTCQGGDYT
Query Conservation 
  







 

 
.




  
       
    
    

        
            .  



 
 
   
Alig confidence 








.





.















..





























.













Template Conservation   






 .
          
       



.. 
                        

    

 
 
 

   
Template Sequence  LIKVGLVGI. GAQXQENLLPSLLQXQDIRIVAA. . CDSDLERARRVHRFISDIPVLDNVPAXLNQVPLDAVVXAGPPQLH
Template Known Secondary structure 


.STT
TT..
SSGGGGGTS
S

SSS

S
S
Template Predicted Secondary structure 


.





..





















Template SS confidence 















































































   3......10. ........20.........30.... .....40.........50.........60.........70.........
 
   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  NEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSV
Query Conservation            
    





 

         



   
         






 

   
 
 

     
  
 
Alig confidence 












..

.......











.










































Template Conservation        

  


..

....... 


 
    

.  
   
   
    
    
  
     
  
  
 

 
  
Template Sequence  FEXGLLAXSKGVN. . VF. . . . . . . VEKPPCATLEEL. ETLIDAARRSDVVSGVGXNFKFARPVRQLREXTQVDEFGETLH
Template Known Secondary structure  TT
.........
S
S
SS.T




TSGGG

Template Predicted Secondary structure 


.........







.














Template SS confidence 















































































   80.........90.. .. .....100...... ...110.........120.........130.........140.........
 
   159160.........170.
Predicted Secondary structure 









Query SS confidence 












Query Sequence  ATYQAASGGGARH
Query Conservation   
 






   
Alig confidence 












Template Conservation               
Template Sequence  IQLNHYANKPRAP
Template Known Secondary structure 



SS
Template Predicted Secondary structure 






Template SS confidence 












   150.........160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions