Job Description P0A9Q9 Confidence 100.00% Date Thu Jan 5 11:11:02 GMT 2012 Rank 13 Aligned Residues 303 % Identity 22% Template c3hskB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aspartate-semialdehyde dehydrogenase; PDBTitle: crystal structure of aspartate semialdehyde dehydrogenase2 with nadp from candida albicans Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.													.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	N	V	G	F	I	G	W	R	G	M	V	G	S	V	L	M	Q	R	M	V	E	E	R	D	F	D	A	I	R	P	V	F	F	S	T	S	Q	L	G	Q	A	A	P	S	F	G	G	T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	T	L	Q	D	A	F	D	L	E	A	L	K	A	L	D	I
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		V	K	K	A	G	V	L	G	A	T	G	S	V	G	Q	R	F	I	L	L	L	S	K	H	P	E	F	E	I	H	A	L	.	.	G	A	S	S	R	S	A	G	K	K	Y	K	D	A	A	S	W	K	Q	T	E	T	L	P	E	T	E	Q	D	I	V	V	Q	E	C	K	P	E	G	N	F	L	E	C	D	V
Template Known Secondary structure									T	T	T	S												T		T	T							.	.				T	T	T	T	T	S	B										S	S								T		B				S	S	S	S	S	G	G	G	G		S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	T	C	Q	G	G	D	Y	T	N	E	I	Y	P	K	L	R	E	S	G	W	Q	G	Y	W	I	D	A	A	S	S	L	R	M	K	D	D	A	I	I	I	L	D	P	V	N	Q	D	.	.	.	.	.	.	.	.	.	.	.	V	I	T	D	G	L	N	N	G	I	R	T	F	V	G	G	N	C	T	V
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.
Template Sequence		V	F	S	G	L	D	A	D	V	A	G	D	I	E	K	S	F	V	E	A	G	L	A	.	.	V	V	S	N	A	K	N	Y	R	R	E	K	D	V	P	L	V	V	P	I	V	N	P	E	H	I	D	V	V	E	N	K	V	K	Q	A	V	S	K	G	G	K	K	P	G	F	I	I	C	I	S	N	C	S	T
Template Known Secondary structure																					T	T			.	.					S	S	T	T	T	T		T	T	S					T	T	T		G	G	G	G														T	S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		S	L	M	L	M	S	L	G	G	L	F	A	N	.	D	L	V	D	W	V	S	V	A	T	Y	Q	A	A	S	G	G	G	A	R	H	M	R	E	L	L	T	Q	M	G	H	L	Y	G	H	V	A	D	E	L	A	T	P	S	S	A	I	L	D	I	E	R	K	V	T	T	L	T	R	S	G	E	L	P	V	D
Query Conservation															.
Alig confidence															.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	L	V	A	P	L	K	P	L	V	E	K	F	G	P	I	D	A	L	T	T	T	T	L	Q	A	I	S	P	G	V	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.													.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Query Sequence		N	F	G	V	P	L	A	G	S	L	I	P	W	I	D	K	Q	L	D	N	G	Q	S	R	E	E	W	K	G	Q	A	E	T	N	K	I	L	N	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	V	I	P	V	D	G	L	C	V	R	V	G	A	L	R	C	H	S	Q	A	F	T	I	K	L	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Alig confidence		.	.	.												.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation		.	.	.												.	.	.	.	.	.	.	.
Template Sequence		.	.	.	M	D	I	L	D	N	I	V	P	Y	I	.	.	.	.	.	.	.	.	S	G	E	E	D	K	L	E	W	E	T	K	K	I	L	G	G	V	N	A	E	G	T	E	F	V	P	I	P	E	S	E	M	K	V	S	A	Q	C	N	R	V	P	V	I	D	G	H	T	E	C	I	S	L	R	F	A	N
Template Known Secondary structure		.	.	.				T	T			B				.	.	.	.	.	.	.	.	T	T													T					T	T	S	S	S						T	T	T											S		S	S											S	S
Template Predicted Secondary structure		.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
					198	.	200	.	.	.	.	.	.	.	.									.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.									.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.															.	.	.
Query Sequence		K	K	D	V	S	I	P	T	V	E	E	L	L	A	A	H	N	P	W	A	K	V	V	P	N	D	R	E	I	T	M	R	.	.	.	.	.	.	.	.	E	L	T	P	A	A	V	T	G	T	L	T	T	P	.	.	.	V	G	R	L	R	K	L	N	M	G	P	E	F	L	S	A	F	T	V	G	D	Q	L
Query Conservation																																		.	.	.	.	.	.	.	.															.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.															.	.	.								.	.
Template Conservation																																																																		.	.
Template Sequence		R	P	A	P	S	V	E	D	V	K	Q	C	L	R	E	Y	E	C	A	A	S	K	L	G	C	H	S	A	P	K	Q	T	I	H	V	L	D	Q	P	D	R	P	Q	P	R	L	D	R	D	R	D	S	G	Y	G	V	S	V	G	R	I	R	E	D	.	.	S	L	L	D	F	K	M	V	V	L	S	H	N	T
Template Known Secondary structure		S	S																						T		S	S	S		S	S							S	T	T								T	T	T	T	T	T	S	S										.	.	S	S	S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	G	A	A	E	P	L	R	R	M	L	R	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	G	A	A	G	A	G	I	L	I	A	E	I	L
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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